| 
          AquaCrop.jl: A Process-Based Model of Crop Growth
         | 
        
           Published 2025-06-03  
         | 
        
           10.21105/joss.07944
         | 
      
      
        | 
          elfe3D v1.0.1: Modelling with the total electric field approach using finite elements in 3D
         | 
        
           Published 2025-06-03  
         | 
        
           10.21105/joss.07949
         | 
      
      
        | 
          OpenTTDLab: A Python framework for reproducible experiments using OpenTTD
         | 
        
           Published 2025-06-04  
         | 
        
           10.21105/joss.08014
         | 
      
      
        | 
          KeepDelta: A Python Library for Human-Readable Data Differencing
         | 
        
           Published 2025-06-04  
         | 
        
           10.21105/joss.08075
         | 
      
      
        | 
          MultiVae: A Python package for Multimodal Variational Autoencoders on Partial Datasets.
         | 
        
           Published 2025-06-05  
         | 
        
           10.21105/joss.07996
         | 
      
      
        | 
          OpenHPS: A Modular Framework to Facilitate the Development of FAIR Positioning Systems
         | 
        
           Published 2025-06-05  
         | 
        
           10.21105/joss.08113
         | 
      
      
        | 
          Ecos: An accessible and intuitive co-simulation framework
         | 
        
           Published 2025-06-06  
         | 
        
           10.21105/joss.08182
         | 
      
      
        | 
          abspy: A Python package for 3D adaptive binary space partitioning and modeling
         | 
        
           Published 2025-06-06  
         | 
        
           10.21105/joss.07946
         | 
      
      
        | 
          <code>diverse-seq</code>: an application for alignment-free selecting and clustering biological sequences
         | 
        
           Published 2025-06-07  
         | 
        
           10.21105/joss.07765
         | 
      
      
        | 
          gibbonNetR: an R Package for the Use of Convolutional Neural Networks for Automated Detection of Acoustic Data
         | 
        
           Published 2025-06-07  
         | 
        
           10.21105/joss.07250
         | 
      
      
        | 
          SPARC-X-API: Versatile Python Interface for Real-space Density Functional Theory Calculations
         | 
        
           Published 2025-06-09  
         | 
        
           10.21105/joss.07747
         | 
      
      
        | 
          AI-ANNE: (A) (N)eural (N)et for (E)xploration
         | 
        
           Published 2025-06-09  
         | 
        
           10.21105/joss.08039
         | 
      
      
        | 
          DiRe - JAX: A JAX based Dimensionality Reduction Algorithm for Large-scale Data
         | 
        
           Published 2025-06-09  
         | 
        
           10.21105/joss.08264
         | 
      
      
        | 
          Giga Connectome: a BIDS-app for time series and functional connectome extraction
         | 
        
           Published 2025-06-09  
         | 
        
           10.21105/joss.07061
         | 
      
      
        | 
          cellular_raza: Cellular Agent-based Modeling from a Clean Slate
         | 
        
           Published 2025-06-10  
         | 
        
           10.21105/joss.07723
         | 
      
      
        | 
          ICAT: The Interactive Corpus Analysis Tool
         | 
        
           Published 2025-06-10  
         | 
        
           10.21105/joss.06873
         | 
      
      
        | 
          QuantumReservoirPy: A Software Package for Time Series Prediction
         | 
        
           Published 2025-06-10  
         | 
        
           10.21105/joss.07994
         | 
      
      
        | 
          REMORA: Regional Modeling of Oceans Refined Adaptively (built on AMReX)
         | 
        
           Published 2025-06-11  
         | 
        
           10.21105/joss.07958
         | 
      
      
        | 
          <code>ggret</code>: An R package for visualising and manipulating tree‑based phylogenetic networks
         | 
        
           Published 2025-06-12  
         | 
        
           10.21105/joss.07773
         | 
      
      
        | 
          FRAGMENT-MNP: A model of micro- and nanoplastic fragmentation in the environment
         | 
        
           Published 2025-06-12  
         | 
        
           10.21105/joss.08061
         | 
      
      
        | 
          Mozzie: a computationally efficient simulator for the spatio-temporal modelling of mosquitoes
         | 
        
           Published 2025-06-12  
         | 
        
           10.21105/joss.07324
         | 
      
      
        | 
          LMDiskANN.jl: An Implementation of the Low Memory Disk Approximate Nearest Neighbors Search Algorithm
         | 
        
           Published 2025-06-12  
         | 
        
           10.21105/joss.08199
         | 
      
      
        | 
          SegregatedVMSSolver.jl: Linearized and Segregated Stabilized Solver for Large Eddy Simulation in Julia
         | 
        
           Published 2025-06-13  
         | 
        
           10.21105/joss.07564
         | 
      
      
        | 
          Limace.jl: A Julia package to compute hydromagnetic modes in spherical domains
         | 
        
           Published 2025-06-18  
         | 
        
           10.21105/joss.07593
         | 
      
      
        | 
          pyTCR: A tropical cyclone rainfall model for python
         | 
        
           Published 2025-06-19  
         | 
        
           10.21105/joss.08074
         | 
      
      
        | 
          Pointcloud: Implementation of point clouds as graphs in the 3D plant modeling platform GroIMP
         | 
        
           Published 2025-06-19  
         | 
        
           10.21105/joss.08062
         | 
      
      
        | 
          WunDeeDB.jl: An easy to use, zero config, WAL, SQLite backend vector database
         | 
        
           Published 2025-06-20  
         | 
        
           10.21105/joss.08033
         | 
      
      
        | 
          StochasticDominance.jl: A Julia Package for Higher Order Stochastic Dominance
         | 
        
           Published 2025-06-20  
         | 
        
           10.21105/joss.08255
         | 
      
      
        | 
          CompressedBeliefMDPs.jl: A Julia Package for Solving Large POMDPs with Belief Compression
         | 
        
           Published 2025-06-20  
         | 
        
           10.21105/joss.07346
         | 
      
      
        | 
          HeXtractor: Extracting Heterogeneous Graphs from Structured and Textual Data for Graph Neural Networks
         | 
        
           Published 2025-06-23  
         | 
        
           10.21105/joss.08057
         | 
      
      
        | 
          LiGuard: Interactively and Rapidly Create Point-Cloud and Image Processing Pipelines
         | 
        
           Published 2025-06-23  
         | 
        
           10.21105/joss.06751
         | 
      
      
        | 
          kifmm-rs: A Kernel-Independent Fast Multipole Framework in Rust
         | 
        
           Published 2025-06-24  
         | 
        
           10.21105/joss.07124
         | 
      
      
        | 
          RiverFlowDynamics v1.0: A Landlab component for computing two-dimensional river flow dynamics
         | 
        
           Published 2025-06-24  
         | 
        
           10.21105/joss.07823
         | 
      
      
        | 
          CAD_to_OpenMC: from CAD design to particle transport
         | 
        
           Published 2025-06-25  
         | 
        
           10.21105/joss.07710
         | 
      
      
        | 
          Syclops: A Modular Pipeline for Procedural Generation of Synthetic Data
         | 
        
           Published 2025-06-25  
         | 
        
           10.21105/joss.07854
         | 
      
      
        | 
          ConFluxPro: A toolkit for soil gas analysis
         | 
        
           Published 2025-06-26  
         | 
        
           10.21105/joss.08094
         | 
      
      
        | 
          medRCT: Causal mediation analysis estimating interventional effects mapped to a target trial in R
         | 
        
           Published 2025-06-27  
         | 
        
           10.21105/joss.08063
         | 
      
      
        | 
          SPM 25: open source neuroimaging analysis software
         | 
        
           Published 2025-06-27  
         | 
        
           10.21105/joss.08103
         | 
      
      
        | 
          NanoVer Server: A Python Package for Serving Real-Time Multi-User Interactive Molecular Dynamics in Virtual Reality
         | 
        
           Published 2025-06-27  
         | 
        
           10.21105/joss.08118
         | 
      
      
        | 
          SwiftPol: A Python package for building and parameterizing in silico polymer systems
         | 
        
           Published 2025-06-27  
         | 
        
           10.21105/joss.08053
         | 
      
      
        | 
          Solar Data Tools: a Python library for automated analysis of unlabeled PV data
         | 
        
           Published 2025-06-27  
         | 
        
           10.21105/joss.08478
         | 
      
      
        | 
          grepq: A Rust application that quickly filters FASTQ files by matching sequences to a set of regular expressions
         | 
        
           Published 2025-06-30  
         | 
        
           10.21105/joss.08048
         | 
      
      
        | 
          fastatomstruct: A High-Performance Library for Structural and Dynamical Analysis of Atomic Systems
         | 
        
           Published 2025-06-30  
         | 
        
           10.21105/joss.08106
         | 
      
      
        | 
          AirFogSim: A Python Package for Benchmarking Collaborative Intelligence in Low-Altitude Vehicular Fog Computing
         | 
        
           Published 2025-07-01  
         | 
        
           10.21105/joss.08267
         | 
      
      
        | 
          Turftopic: Topic Modelling with Contextual Representations from Sentence Transformers
         | 
        
           Published 2025-07-03  
         | 
        
           10.21105/joss.08183
         | 
      
      
        | 
          AutoUncertainties: A Python Package for Uncertainty Propagation
         | 
        
           Published 2025-07-03  
         | 
        
           10.21105/joss.08037
         | 
      
      
        | 
          CADET-Core 5.0: High-Performance Solver for Advanced Biotechnology Process Modeling
         | 
        
           Published 2025-07-03  
         | 
        
           10.21105/joss.07881
         | 
      
      
        | 
          cuisto: A Python package to quantify neurohistological data from QuPath and ABBA
         | 
        
           Published 2025-07-03  
         | 
        
           10.21105/joss.07906
         | 
      
      
        | 
          MEDUSA: An R tool to model equity and distributional impacts
         | 
        
           Published 2025-07-07  
         | 
        
           10.21105/joss.07697
         | 
      
      
        | 
          GBNet: Gradient Boosting packages integrated into PyTorch
         | 
        
           Published 2025-07-07  
         | 
        
           10.21105/joss.08047
         |